miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|229404655|gb|GO632577.1|GO632577 GGGGGAGTGAATGTTGGACAACAGACCAAAGTCAGCTGTGAGAGAAGCTGCTGAAGACGGGATCCCTAAGGAGGAACAAC
CGTACCCATTTTTCTAACCTTGGCTTCTGGTTCTTCTTCTTCTTGACTAACTCAACTTTTGACAGTGTCAGTCATGTCGG
AGGGAGAAGAGTTGTCCTACAGCGAAGCCATTAAGAAGGCGAGCACTTCCATCTCTCGCTTCCCTCTCATCCCAGTCAGA
GGAACTCCTCTCATGTCCTTCATCGCCAACAACTGGGACTCCATCTGGGCTTTCCGTCCTGACCCCTCAGACCTCCTCAT
CGCCACATACCCCAAAGCAGGGACCACATGGACCCAGGAGATAGTTGACCTACTTCTTCACAACGGAGATGCTGAGGCCT
GCAAACGAGCCCCGACACCCGTCCGCAGTCCTTTCCTAGAGATCTTCTCTCCACCACCCATTCCTTCAGGTCTTGATCAT
CTGAAAACCATGGATCCTCCAAGGATTATCAAGACACATCTTCCTTTTCAGTTGGTGCCTACAGGATTTTGGGAAAACAA
GTGCAAGGTTATTTACGTGGCACGCAATGCCAAAGACAACCTGGTGAGCTACTTCTACTTTGATTGTATGAATCTGACCC
AACCTGAGCCGGGACCCTGGGAGGGCTACATCCCCAAGTTCATGAAAGGAGAGTTGTCGTGGGGCTCCTGGTACGACCAT
GTGAAAGGTTACTGGATGGAGAGAGAGAAGAAGAACATCCTTTACCTCTTCTACGAGGACATGAAAGAGAATCCTCGGCG
TGAGGTAGAGCGCATCATGAAGTACCTGGACTTGTCCGTCTCTGATGAGGTCATCAGCAGGATTGTGGAGCTCACGTCCT
TTA




Most similar to sp|Q80VR3|ST1C1_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q80VR3|ST1C1_MOUSE Sulfotransferase 1C1 OS=Mus musculus
           GN=Sult1c1 PE=1 SV=1
          Length = 304

 Score =  260 bits (665), Expect = 8e-69
 Identities = 118/216 (54%), Positives = 156/216 (72%)
 Frame = +1

Query: 235 VRGTPLMSFIANNWDSIWAFRPDPSDLLIATYPKAGTTWTQEIVDLLLHNGDAEACKRAP 414
           V G  +   ++ NWD IW F+  P DLLIATY KAGTTWTQEIVD++ ++GD + C+RA 
Sbjct: 23  VNGILMSKMMSENWDKIWNFQAKPDDLLIATYAKAGTTWTQEIVDMIQNDGDVQKCQRAN 82

Query: 415 TPVRSPFLEIFSPPPIPSGLDHLKTMDPPRIIKTHLPFQLVPTGFWENKCKVIYVARNAK 594
           T  R PF+E   PPP+ SGLD    M  PR +KTHLP Q++P  FW+   K+IYVARNAK
Sbjct: 83  TYDRHPFIEWTLPPPLNSGLDLANKMPSPRTLKTHLPVQMLPPSFWKENSKIIYVARNAK 142

Query: 595 DNLVSYFYFDCMNLTQPEPGPWEGYIPKFMKGELSWGSWYDHVKGYWMEREKKNILYLFY 774
           D LVSY+YF  MN   P+PG    YI  F  G++ WGSWYDHVKG+W  ++K  ILYLFY
Sbjct: 143 DCLVSYYYFSRMNKMLPDPGTLGEYIETFKAGKVLWGSWYDHVKGWWDVKDKHRILYLFY 202

Query: 775 EDMKENPRREVERIMKYLDLSVSDEVISRIVELTSF 882
           EDMKE+P+RE+++I+K+L+  +S+EV+++I+  TSF
Sbjct: 203 EDMKEDPKREIKKIVKFLEKDISEEVLNKIIHHTSF 238